Protein PCNA map

Identifiers
proliferating cell nuclear antigen
HUGO:PCNA
HUGO:PCNA, HGNC:8729, ENTREZ:5111, UNIPROT:P12004
HUGO:PCNA HGNC:8729 ENTREZ:5111 UNIPROT:P12004 GENECARDS:PCNA REACTOME:97870 ATLASONC:PCNAID41670ch20p12 WIKI:PCNA

Maps_Modules
HMC:GENOME_INSTABILITY_AND_MUTATION
 Cell Cycle DNA Repair  map  / NER  map
 Cell Cycle DNA Repair  map  / BER  map
 Cell Cycle DNA Repair  map  / MMR  map
 Cell Cycle DNA Repair  map  / TLS  map
HMC:EVADING_GROWTH_SUPPRESSORS
 Survival  map  / PI3K_AKT_MTOR  map

References
PMID:14624239, PMID:1974050
PMID:15703371, PMID:19847258, PMID:16697054, PMID:14726013
 NATURAL_KILLER  map
CASCADE:NKP44
PMID:23414611, PMID:22021614
Proliferating cell nuclear antigen (PCNA), which is overexpressed by cancer cells, has been reported as an inhibitory ligand of NKp44.
PMID:11756412

PCNA@Nucleus

References
ce_re247( Cell Cycle DNA Repair  map ):
De-ubiquitination of PCNA serves a negative loop for inactivation of TLS
PMID:16531995
ce_re8( Cell Cycle DNA Repair  map ):
GADD45 modulated and causes complex formation APE:PCNA. GADD is rgulated by p53:
PMID:17599061, PMID:23485469
ce_re24:( Cell Cycle DNA Repair  map ) PMID:22973052
ce_re166( Cell Cycle DNA Repair  map ):
Fanconi recognition complex as FA core complex recruits NER, HR, TLS proteins that collectively repair the ICL. If Fanconi proteins participating in the recognition are dysactivated, there is no any other mechanism to recognize ILSs, therefore, even if NER, HR and TLS are correct, they will not perform the repair without core Fanconi proteins.
PMID:19686080
ce_re168( Cell Cycle DNA Repair  map ):
PMID:18157158
Ubiquitination of PCNA by RAD6-RAD18 increases affinity of PCNA to POLH and makes switch from PCNA-POLD to PCNA-POLH and stops translation and initiates TLS pathway
PMID:15280666, PMID:18498753
ce_re181( Cell Cycle DNA Repair  map ):
SUMOlated PCNA recognizes stalled replication fork and blocks homologous recombination, re-orients toward TLS
PMID:19217833, PMID:18157158, PMID:19851286
ce_re254( Cell Cycle DNA Repair  map ):
GADD45 interacts with PCNA and activates NER-only Global(GG-NER):
PMID:19652693, PMID:10779360

PCNA|​K164_don|​K127_don@Nucleus

References
ce_re181( Cell Cycle DNA Repair  map ):
SUMOlated PCNA recognizes stalled replication fork and blocks homologous recombination, re-orients toward TLS
PMID:19217833, PMID:18157158, PMID:19851286
ce_re114( Cell Cycle DNA Repair  map ):
PMID:18171670, PMID:20064462
For regulation of HR by cell cycle. CDK1 is essential to switch cells from C_NHEJ to HR during S/G2 phase: PMID:15496928
The complex BRCA2:FANCC:FANCG:XRCC3 activates HR:
PMID:18212739
For role of BLM:TOP3:RMI1 complex in the HR resection step:
PMID:19490890
For central role of the MRN complex and CtIP in the resection of the DNA that turns on the HR and off C_NHEJ:
PMID:20021983
For inhibition of HR by RECQ5:
PMID:19270065
For role of CDC2 (CDK1) in DNA resection initiation in S/G2 phase, HR initiation:
PMID:15655342, PMID:15549137, PMID:15496928
RNF8:MDC1 complex recruit HR-related proteins by this shifting from C_NHEJ to HR:
PMID:18001825
PMID:19217833
ce_re220( Cell Cycle DNA Repair  map ):
Stalled replication fork is mostly induced by ICLs


Modifications:
In compartment: Nucleus
  1. PCNA@Nucleus map
  2. PCNA|​hm3@Nucleus map
  3. PCNA|​K164_ubi@Nucleus map
  4. PCNA|​K164_don|​K127_don@Nucleus map
  5. PCNA|​K164_ubi|​ubi|​ubi|​ubi@Nucleus map
In compartment: TUMOR_CELL_AS_INDUCTOR_Membrane
  1. PCNA@TUMOR_CELL_AS_INDUCTOR_Membrane map
Participates in complexes:
In compartment: Nucleus
  1. GADD45A:​PCNA@Nucleus map
  2. CTIP*|​emp:​PCNA@Nucleus map
  3. PCNA|​K164_ubi:​REV1@Nucleus map
  4. PCNA|​K164_ubi:​POLZ*@Nucleus map
  5. FEN1:​PCNA:​WRN@Nucleus map
  6. PCNA|​K164_ubi:​POLH:​REV1@Nucleus map
  7. PCNA|​K164_ubi:​POLI:​REV1@Nucleus map
  8. PCNA|​K164_ubi:​POLK:​REV1@Nucleus map
  9. LIG1:​PARP1|​PolyADPribose_unk|​pho:​PCNA@Nucleus map
  10. APE*|​Thr233_pho|​ubi:​Mg2+:​PCNA:​WRN@Nucleus map
  11. EXO1:​PCNA:​RFC*:​hMutL*:​hMutS*@Nucleus map
  12. PCNA|​hm3:​POLD1:​POLD2:​POLD3:​POLD4@Nucleus map
  13. PARP1:​PCNA:​POLB:​POLD*:​POLE*:​RFC*@Nucleus map
  14. ATRIP:​ATR|​pho:​CHEK1|​pho:​CLSPN|​pho:​PCNA|​K164_ubi:​TIM1*@Nucleus map
  15. CHTF18:​PCNA:​POLD*:​POLE*:​POLK:​RFC*:​RPA2|​pho:​XRCC1|​pho@Nucleus map
  16. BRCA1:​BRCA2:​FANCD2|​pho:​FANCI|​pho:​H2AFX|​S139_pho|​ubi:​NBS1*|​S343_pho:​PCNA:​RAD51:​TIP60*@Nucleus map
  17. BRCA1:​BRCA2:​FANCD2|​K561_ubi|​pho:​FANCI|​K523_ubi|​pho:​H2AFX|​S139_pho|​ubi:​NBS1*|​S343_pho:​PCNA:​RAD51:​TIP60*@Nucleus map
Participates in reactions:
As Reactant or Product:
  1. POLB@Nucleus map + PCNA@Nucleus map + POLE*@Nucleus map + POLD*@Nucleus map + PARP1|​PolyADPribose_unk|​pho@Nucleus map + RFC*@Nucleus map map PARP1:​PCNA:​POLB:​POLD*:​POLE*:​RFC*@Nucleus map
  2. ce_s2743 + ce_s834 + EXO1@Nucleus map + RPA1:​RPA2:​RPA3@Nucleus map + PCNA@Nucleus map + RFC*@Nucleus map map EXO1:​PCNA:​RFC*:​hMutL*:​hMutS*@Nucleus map
  3. FANCD2|​K561_ubi|​pho:​FANCI|​K523_ubi|​pho@Nucleus map + BRCA1|​S988_pho|​S1387_pho|​S1423_pho|​S1497_pho|​S1524_pho|​active@Nucleus map + BRCA2@Nucleus map + NBS1*|​S343_pho@Nucleus map + RAD51@Nucleus map + PCNA@Nucleus map + H2AFX|​S139_pho|​ubi@Nucleus map + TIP60*@Nucleus map map BRCA1:​BRCA2:​FANCD2|​K561_ubi|​pho:​FANCI|​K523_ubi|​pho:​H2AFX|​S139_pho|​ubi:​NBS1*|​S343_pho:​PCNA:​RAD51:​TIP60*@Nucleus map
  4. PCNA@Nucleus map map PCNA|​K164_ubi@Nucleus map
  5. PCNA|​K164_ubi@Nucleus map + POLK@Nucleus map + REV1@Nucleus map map PCNA|​K164_ubi:​POLK:​REV1@Nucleus map
  6. PCNA|​K164_ubi@Nucleus map + POLI@Nucleus map + REV1@Nucleus map map PCNA|​K164_ubi:​POLI:​REV1@Nucleus map
  7. PCNA|​K164_ubi@Nucleus map + REV1@Nucleus map map PCNA|​K164_ubi:​REV1@Nucleus map
  8. PCNA|​K164_ubi@Nucleus map + POLZ*@Nucleus map map PCNA|​K164_ubi:​POLZ*@Nucleus map
  9. PCNA@Nucleus map map PCNA|​K164_don|​K127_don@Nucleus map
  10. PCNA|​K164_ubi@Nucleus map map PCNA|​K164_ubi|​ubi|​ubi|​ubi@Nucleus map
  11. CTIP*|​emp@Nucleus map + PCNA@Nucleus map map CTIP*|​emp:​PCNA@Nucleus map
  12. POLE*@Nucleus map + POLD*@Nucleus map + RFC*@Nucleus map + PCNA@Nucleus map + CHTF18@Nucleus map + POLK@Nucleus map + XRCC1|​pho@Nucleus map + ce_s3289 map CHTF18:​PCNA:​POLD*:​POLE*:​POLK:​RFC*:​RPA2|​pho:​XRCC1|​pho@Nucleus map
  13. PCNA@Nucleus map + FEN1@Nucleus map + WRN@Nucleus map map FEN1:​PCNA:​WRN@Nucleus map
  14. PCNA|​K164_ubi@Nucleus map map PCNA@Nucleus map
  15. BRCA1:​BRCA2:​FANCD2|​K561_ubi|​pho:​FANCI|​K523_ubi|​pho:​H2AFX|​S139_pho|​ubi:​NBS1*|​S343_pho:​PCNA:​RAD51:​TIP60*@Nucleus map map BRCA1:​BRCA2:​FANCD2|​pho:​FANCI|​pho:​H2AFX|​S139_pho|​ubi:​NBS1*|​S343_pho:​PCNA:​RAD51:​TIP60*@Nucleus map
  16. PCNA@Nucleus map + LIG1@Nucleus map + PARP1|​PolyADPribose_unk|​pho@Nucleus map map LIG1:​PARP1|​PolyADPribose_unk|​pho:​PCNA@Nucleus map
  17. GADD45A@Nucleus map + PCNA@Nucleus map map GADD45A:​PCNA@Nucleus map
  18. TIM1*@Nucleus map + CLSPN|​pho@Nucleus map + PCNA|​K164_ubi@Nucleus map + ATRIP:​ATR|​pho@Nucleus map + CHEK1|​pho|​active@Nucleus map map ATRIP:​ATR|​pho:​CHEK1|​pho:​CLSPN|​pho:​PCNA|​K164_ubi:​TIM1*@Nucleus map
  19. REV1@Nucleus map + PCNA|​K164_ubi@Nucleus map + POLH@Nucleus map map PCNA|​K164_ubi:​POLH:​REV1@Nucleus map
  20. Mg2+@Nucleus map + APE*|​Thr233_pho|​ubi@Nucleus map + PCNA@Nucleus map + WRN@Nucleus map map APE*|​Thr233_pho|​ubi:​Mg2+:​PCNA:​WRN@Nucleus map
  21. PCNA@Nucleus map map DNA synthesis@Nucleus map
  22. PCNA@Nucleus map + p21CIP1*@Nucleus map map su_akt1_s_akt2_s384
  23. PCNA|​hm3@Nucleus map map Sliding clamp formation@Nucleus map
  24. RFC1:​RFC2:​RFC3:​RFC4:​RFC5@Nucleus map map PCNA|​hm3@Nucleus map
  25. POLD1:​POLD2:​POLD3:​POLD4@Nucleus map + PCNA|​hm3@Nucleus map map PCNA|​hm3:​POLD1:​POLD2:​POLD3:​POLD4@Nucleus map
  26. PCNA|​hm3:​POLD1:​POLD2:​POLD3:​POLD4@Nucleus map map PCNA|​hm3:​POLD1:​POLD2:​POLD3:​POLD4@Nucleus map
  27. PCNA|​hm3:​POLD1:​POLD2:​POLD3:​POLD4@Nucleus map map POLD1:​POLD2:​POLD3:​POLD4@Nucleus map + PCNA|​hm3@Nucleus map
As Catalyser:
  1. gBER_M-glyc_DNA_st2*@Nucleus map map gBER_M-glyc_DNA_st3*@Nucleus map
  2. gHR_DNA_st1*@Nucleus map map gHR_DNA_st2*@Nucleus map
  3. S phase@Nucleus map map G2 phase@Nucleus map
  4. gGG-NER_DNA_st2*@Nucleus map map gTC-NER_GG-NER_DNA_st3*@Nucleus map
  5. gHR_DNA_st2*@Nucleus map map gHR_DNA_st3*@Nucleus map
  6. gHR_DNA_st6*@Nucleus map map gHR_DNA_st7*@Nucleus map
  7. gFanconi_DNA_st4*@Nucleus map map gHR_DNA_st2*@Nucleus map
  8. gDamaged_DNA*@Nucleus map map gRepaired_DNA*@Nucleus map
  9. gLnP_BER_M-glyc_st5*@Nucleus map map gLnP_BER_M-glyc_st6*@Nucleus map
  10. gHR_DNA_st1*@Nucleus map map gFanconi_DNA_st1*@Nucleus map
  11. gGG-NER_DNA_st1*@Nucleus map map gGG-NER_DNA_st2*@Nucleus map
  12. gTC-NER_GG-NER_DNA_st4*@Nucleus map + dNTPs@Nucleus map map gTC-NER_GG-NER_DNA_st5*@Nucleus map
  13. gMMR_DNA_st2*@Nucleus map map gMMR_DNA_st3*@Nucleus map
  14. gBER_M-glyc_DNA_st3*@Nucleus map + dNTPs@Nucleus map map gLnP_BER_M-glyc_st4*@Nucleus map
  15. No DNA replicarion@Nucleus map map DNA replicarion@Nucleus map
  16. gTLS_DNA_st1*@Nucleus map map gTLS_DNA_st2*@Nucleus map
  17. gBER_B-glyc_DNA_st3*@Nucleus map map gShP_BER_M-glyc_st4_B-glyc_DNA_st4*@Nucleus map + 3'ddR5P@Nucleus map
  18. gLnP_BER_M-glyc_st4*@Nucleus map map gLnP_BER_M-glyc_st5*@Nucleus map + Modified 2-12 nucl fragment@Nucleus map
  19. DAP12*:​NKp44*@INNATE_IMMUNE_CELL_Membrane map map DAP12*|​pho:​NKp44*@INNATE_IMMUNE_CELL_Membrane map
  20. Nucleotides@Nucleus map map gOkazaki Fragments@Nucleus map
  21. Nucleotides@Nucleus map map DNA Flap:​Okazaki Fragments:​RNA primer@Nucleus map