Protein TNF map

Identifiers
HUGO:TNF
tumor necrosis factor
HUGO:TNF hgnc_id:HGNC:11892 HGNC:11892 ENTREZ:7124 UNIPROT:P01375
TNFA, "tumor necrosis factor (TNF superfamily, member 2)"
HUGO:TNF HGNC:11892 ENTREZ:7124 UNIPROT:P01375

Maps_Modules
HMC:AVOIDING_IMMUNE_DESTRUCTION
 Adaptive Immune Response  map  / TCR_SIGNALING  map
HMC:TUMOR_PROMOTING_INFLAMMATION
HMC:ACTIVATING_INVASION_AND_METASTASIS
 Cancer Associated Fibroblasts  map  / INFLAMMATORY_SIGNALING_PATHWAYS  map
 Cancer Associated Fibroblasts  map  / CYTOKINES_CHEMOKINES_PRODUCTION  map
 EMT Senescence  map  / EMT_REGULATORS  map
 EMT Senescence  map  / ECM  map
 EMT Senescence  map  / SENESCENCE  map
HMC:RESISTING_CELL_DEATH
HMC:DEREGULATING_CELLULAR_ENERGETICS
 Regulated Cell Death  map  / DEATH_RECEPTOR_PATHWAYS  map
 Regulated Cell Death  map  / MITOCHONDRIAL_METABOLISM  map
 Regulated Cell Death  map  / TNF_RESPONSE  map
 Regulated Cell Death  map  / ER_STRESS  map
 Innate Immunity  map  / IMMUNOSTIMULATORY_CYTOKINE_PATHWAYS  map
 Innate Immunity  map  / IMMUNOSTIMULATORY_CYTOKINE_EXPRESSION  map

References
PMID:21411734 PMID:20038811
PMID:23769623
TNF is one of key CAF activating agents
PMID:17916596
In vitro analyses
revealed a striking induction of IL-8 expression in CAFs
and LFs by tumor necrosis factor-alpha (TNFA). The effect
of TNFA on CAFs is inhibited by the nuclear factor-kB
inhibitor parthenolide.
PMID:8910423
both TNFR1 and TNFR2 receptors play role in TNF signal transduction in mouse fibroblasts
Tnfr1 is essential in mediating proliferative signals
Tnfr1 Exclusively Activates Transcription Factor NF-??B in Mouse Fibroblasts
Ap-1 was independently activated through both Tnf receptors, probably via prolonged activation of the c-Jun kinase
Tnfr1 and Tnfr2 Control Erk1 and Erk2 Kinase Activity
Tnfr1 and Tnfr2 Control activation of RPS6KA1
Raf-1, Mek-1, and Mekk responded with enhanced kinase activity to Tnf treatment in all wt, tnfr1o, and tnfr2o fibroblasts, supporting again that both Tnf receptors individually are signaling-competent. The activation factors were about 1.5-4 for Raf-1, Mekk, and Mek-1 in wt, tnfr1o, and tnfr2o fibroblasts (Table II). Interestingly, Raf-B, an isoform of c-Raf-1 reported to be mainly localized to the brain (64, 65, 66), also responded to Tnf treatment of the fibroblasts.
PMID:11112697
TNF-(alpha) substantially promoted activation of pro-MMP-2 in dermal fibroblasts embedded in type-I collagen. In marked contrast, collagen or TNF-(alpha) individually had little influence on the fibroblast-mediated pro-MMP-2 activation. One well-characterized mechanism for pro-MMP-2 activation is through a membrane type matrix metalloproteinase, such as MT1-MMP. We report that TNF-(alpha) significantly induced MT1-MMP at the mRNA and protein levels when the dermal fibroblasts were grown in collagen. Although the intracellular signaling pathway regulating mt1-mmp gene expression is still obscure, both TNF-(alpha) and collagen activate the NF-(kappa)B pathway. In this report we provide three sets of evidence to support a hypothesis that activation of NF-(kappa)B is essential to induce MT1-MMP expression in fibroblasts after TNF-(alpha) exposure. First, SN50, a peptide inhibitor for NF-(kappa)B nuclear translocation, simultaneously blocked the TNF-(alpha) and collagen mediated MT1-MMP induction and pro-MMP-2 activation.
PMID:26201938
The expression levels of cytokine genes, including those for IL6, CXCL8, TNF, TGFB1, and VEGFA, were higher in CAFs. T cell proliferation was suppressed more by CAFs or their supernatants than by NFs.
PMID:20184663
PMID:23567181
Tumor necrosis factor (TNF) and IL6 were shown to be a potent mast cell chemoattractant. TNF induced a strong, dose-dependent migratory response of peritoneal mast cells
PMID:19411070
TNFa dramatically enhanced the protein stabilization of Snail1 through NF-kB mediated CSN2 induction.
PMID:23430059
PMID:21133840
TNF is a pleiotropic cytokine produced by many different types of cells in the body. However, cells of the monocytic lineage???such as macrophages, astroglia, microglia, Langerhans cells, Kupffer cells, and alveolar macrophages???are the primary synthesizers of TNF
PMID:1431106
TNF induced tumoricidal activity of macrophages.
PMID:14607933,??14625680
TNF and IFNG cooperate in the activation of macrophages.
PMID:18633355
TNF is pro-angiogenic facror.
PMID:23510023, PMID:23170255
TRAIL, FASL and TNF provides Dendritic cell tumor killing activity.()??
L10 stimulates HO1 expression via MAPK p38 stimulation. HO-1 mediates IL-10-induced suppression of TNF- production and IL-10-induced suppression of MMP9 and INOS expression
PMID:22955274
SHIP inhibit MAPKp38 activation and prevent MNK1 phosphorylation by inhibiting the p38 MAPK pathway downstream of IL10. MNK1 regulates TNFa mRNA polysome assembly and upregulates TNFa translation.IL-10 Inhibits TNF Translation through SHIP1-mediated Inhibition of Mnk1
PMID:15699106, PMID:12646658
Phosphorylated STAT1 binds to TNF promoter end induces TNF expression downstream of IFNG.
PMID:15099563
Mast cells produce cytokines TNF-a, TGF-b, IFN-a, IL-1a, IL-1b, IL-5, IL-6,
IL-13, IL-16, IL-18
PMID:24092389
TANs from early tumors are more cytotoxic toward tumor cells and produce higher levels of TNF-??, NO, and H2O2 and, in established tumors, these functions are downregulated and TAN acquire a more protumorigenic phenotype
PMID:21826665
TANs produce TNF and IL1B, probably downstream of TLR4

TNF@default

References
ca_re284( Cancer Associated Fibroblasts  map ):
PMID:11875494
IL10-induced p38 phosphorylation.
PMID:20435894
SHIP inhibit MAPKp38 activation and prevent
MKNK1 phosphorylation by inhibiting the p38MAPK
pathway downstream of IL10.
PMID:10925299
IL13 induces p38 MAPK phosphorilation and activation, p38 MAPK participates in arginase activation??downstream of IL13.
PMID:23508573
HMGB1 induces activation (phosphorylation) of p38 via TLR4.
PMID:12811837, PMID:16713974
TLR signaling can induces STAT1 phosphorylation via p38 and potentiate IFNG signaling.
PMID:16713974
TLR2 activates (induces phosphorylation of) ERKs, JNKs, and p38 rapidly and transiently in control macrophages.
This activation is inhibited by IFNG signaling.
PMID:11438547, PMID:24378531
Both TNFR1 and TNFR2 signaling pathways are needed for activation of p38 MAPK.
ca_re410( Cancer Associated Fibroblasts  map ):
CASCADE:LIF
PMID:22595692
The structure of receptors of IL6 like cytokines

TNF@Extracellular space

References
em_emtc_emtc_re1218( EMT Senescence  map ):
PMID:19411070
Activation of NFKB pathway by TNFa
TNFa dramatically enhanced the protein stabilization of Snail1 through NF-kB mediated CSN2 induction.


Modifications:
In compartment: Cytosol
  1. TNF@Cytosol map
In compartment: Extracellular space
  1. TNF@Extracellular space map
In compartment: INNATE_IMMUNE_CELL_Cytosol
  1. TNF@INNATE_IMMUNE_CELL_Cytosol map
In compartment: T_cell
  1. TNF@T_cell map
In compartment: default
  1. TNF@default map
Participates in complexes:
In compartment: Cytosol
  1. TNF:​TNFR2*:​TRAF1:​TRAF2@Cytosol map
  2. FADD:​RIPK1:​TNF:​TNFR1*:​TRADD:​TRAF2@Cytosol map
  3. FADD:​RIPK1|​ubi:​TNF:​TNFR1*:​TRADD:​TRAF2|​ubi@Cytosol map
In compartment: INNATE_IMMUNE_CELL_Membrane
  1. TNF:​TNFR2*:​TRAF1:​TRAF2@INNATE_IMMUNE_CELL_Membrane map
  2. FADD:​RIPK1:​TNF:​TNFR1*:​TRADD:​TRAF2@INNATE_IMMUNE_CELL_Membrane map
  3. FADD:​RIPK1|​ubi:​TNF:​TNFR1*:​TRADD:​TRAF2|​ubi@INNATE_IMMUNE_CELL_Membrane map
In compartment: TNFRSF1 Receptor Complex
  1. TNFRSF1A|​hm3:​TNF|​hm3@TNFRSF1 Receptor Complex map
Participates in reactions:
As Reactant or Product:
  1. rTNF@T_cell map map TNF@T_cell map
  2. TNF@default map + TNFR1*@Cytosol map + TRADD@Cytosol map + TRAF2@Cytosol map + RIPK1@Cytosol map + FADD@Cytosol map map FADD:​RIPK1:​TNF:​TNFR1*:​TRADD:​TRAF2@Cytosol map
  3. FADD:​RIPK1:​TNF:​TNFR1*:​TRADD:​TRAF2@Cytosol map map FADD:​RIPK1|​ubi:​TNF:​TNFR1*:​TRADD:​TRAF2|​ubi@Cytosol map
  4. TNF@default map + TNFR2*@Cytosol map + TRAF2@Cytosol map + TRAF1@Cytosol map map TNF:​TNFR2*:​TRAF1:​TRAF2@Cytosol map
  5. TNF@Cytosol map map TNF@default map
  6. TNF@Cytosol map map CYTOKINE_CHEMOKINE_PRODUCTION@default map
  7. TNF@Extracellular space map map NF-_kappa_B_p65*@Cytosol map
  8. TNF@INNATE_IMMUNE_CELL_Cytosol map map TNF@default map
  9. rTNF@INNATE_IMMUNE_CELL_Cytosol map map TNF@INNATE_IMMUNE_CELL_Cytosol map
  10. TNF@INNATE_IMMUNE_CELL_Cytosol map map TNF@INNATE_IMMUNE_CELL_Cytosol map
  11. TNF@INNATE_IMMUNE_CELL_Cytosol map map IMMUNE_ACTIVATION@default map
  12. FADD:​RIPK1:​TNF:​TNFR1*:​TRADD:​TRAF2@INNATE_IMMUNE_CELL_Membrane map map FADD:​RIPK1|​ubi:​TNF:​TNFR1*:​TRADD:​TRAF2|​ubi@INNATE_IMMUNE_CELL_Membrane map
  13. TNF@default map + TNFR1*@INNATE_IMMUNE_CELL_Membrane map + TRADD@INNATE_IMMUNE_CELL_Membrane map + TRAF2@INNATE_IMMUNE_CELL_Membrane map + RIPK1@INNATE_IMMUNE_CELL_Membrane map + FADD@INNATE_IMMUNE_CELL_Membrane map map FADD:​RIPK1:​TNF:​TNFR1*:​TRADD:​TRAF2@INNATE_IMMUNE_CELL_Membrane map
  14. TNF@default map + TNFR2*@INNATE_IMMUNE_CELL_Membrane map + TRAF1@INNATE_IMMUNE_CELL_Membrane map + TRAF2@INNATE_IMMUNE_CELL_Membrane map map TNF:​TNFR2*:​TRAF1:​TRAF2@INNATE_IMMUNE_CELL_Membrane map
  15. TNF@INNATE_IMMUNE_CELL_Cytosol map map ANGIOGENESIS@default map
  16. TNF@Extracellular space map + TNFRSF1A@Cytosol map map TNFRSF1A|​hm3:​TNF|​hm3@TNFRSF1 Receptor Complex map
  17. rTNF@Nucleus map map TNF@Cytosol map
As Catalyser:
  1. gFOXP3@T_cell map map rFOXP3@T_cell map
  2. IKBKG:​IKK_alpha_*:​IKK_beta_*@Cytosol map map IKBKG|​ubi:​IKK_alpha_*:​IKK_beta_*|​pho@Cytosol map
  3. MAP3K7@Cytosol map + TAB2@Cytosol map + TAB3@Cytosol map map (MAP3K7:​TAB2:​TAB3)|​active@Cytosol map
  4. JNK*@Cytosol map map JNK*|​pho|​active@Cytosol map
  5. p38*@Cytosol map map p38*|​pho|​active@Cytosol map
  6. ERK1/2*@Cytosol map map ERK1/2*|​pho@Cytosol map
  7. gLIF@Cytosol map map rLIF@Cytosol map
  8. gMIF@INNATE_IMMUNE_CELL_Cytosol map map rMIF@INNATE_IMMUNE_CELL_Cytosol map
  9. MIF@INNATE_IMMUNE_CELL_Cytosol map map MIF@default map
  10. HMGB1@INNATE_IMMUNE_CELL_Cytosol map map HMGB1@default map
  11. CXCL1@INNATE_IMMUNE_CELL_Cytosol map map CXCL1@default map
  12. IL8*@INNATE_IMMUNE_CELL_Cytosol map map IL8*@default map
  13. gCCR2@INNATE_IMMUNE_CELL_Cytosol map map rCCR2@INNATE_IMMUNE_CELL_Cytosol map
  14. CD74:​MHC_class_II*@Endoplasmic Reticulum_Membrane map map CD74:​MHC_class_II*@INNATE_IMMUNE_CELL_Membrane map
  15. MAP3K7@INNATE_IMMUNE_CELL_Cytosol map + TAB2@INNATE_IMMUNE_CELL_Cytosol map + TAB3@INNATE_IMMUNE_CELL_Cytosol map map (MAP3K7:​TAB2:​TAB3)|​active@INNATE_IMMUNE_CELL_Cytosol map
  16. gIRF1@INNATE_IMMUNE_CELL_Cytosol map map rIRF1@INNATE_IMMUNE_CELL_Cytosol map
  17. TRAF2@INNATE_IMMUNE_CELL_Membrane map map degraded
  18. IKBKG:​IKK_alpha_*:​IKK_beta_*@INNATE_IMMUNE_CELL_Cytosol map map IKBKG|​ubi:​IKK_alpha_*:​IKK_beta_*|​pho@INNATE_IMMUNE_CELL_Cytosol map
  19. JNK*@INNATE_IMMUNE_CELL_Cytosol map map JNK*|​pho|​active@INNATE_IMMUNE_CELL_Cytosol map
  20. p38*@INNATE_IMMUNE_CELL_Cytosol map map p38*|​pho|​active@INNATE_IMMUNE_CELL_Cytosol map
  21. TRADD@Cytosol map map TRADD@TNFRSF1 Receptor Complex map
  22. TRAF2@Cytosol map map TRAF2@TNFRSF1 Receptor Complex map
  23. DAB2IP@Cytosol map map DAB2IP@TNFRSF1 Receptor Complex map
  24. Ceramide@Cytosol map map rc_s5993
  25. NSMAF|​pho@Cytosol map map NSMAF@Cytosol map
  26. NSMAF@Cytosol map + SMPD1@Cytosol map map NSMAF:​SMPD1@Cytosol map