| Education | |
| 2008 - 2012 |
University of Rennes 1
PhD in Applied Mathematics. Topic : Reduced and hybrid models of biochemical reactions networks - Application to cell cycle modelization. PhD Supervisors : Pr. Ovidiu Radulescu & Pr. Nathalie Theret |
| 2006 - 2008 |
University of Rennes 1 Master degree in Computational Biology (Valedictorian) |
| 2004 - 2006 |
University of Rennes 1 1st year of Master degree in Computer Science |
| 2003 - 2004 |
University of Rennes 1 Bachelor degree in Computer Science |
| 2001 - 2003 |
University of La Rochelle Bachelor of technology degree, speciality in Embedded Systems |
| Experience | |
| 2021 - actuellement |
Institut Curie, U900
Research engineer in the Computational Systems Biology of Cancer's team |
| 2018 - 2021 |
Institut Curie, U900
Postdow fellow in the Computational Systems Biology of Cancer's team |
| 2014 - 2018 |
Instituto Butantan, Laboratório Especial de Toxinologia Aplicada (LETA).
Pós-Doutorado no Centro de Toxinas, Resposta-Imune e Sinalização Celular |
| 2009 (3 months) |
NCBS, Bangalore (International PhD mobility program) Modelling TGFB-dependent NF-kB response in cervical cancer cell lines |
| 2008 (6 months) |
IRISA, Rennes (Master Internship) Development of a reduction algorithm for biological models, applied to the signalisation module of NF-kB |
| 2007 (3 months) |
CNRS UMR 6026, Rennes (Master Internship) Development of a software for predicting transcription factors binding sites, using phylogenetic foot-printing |
| 2003 (3 months) |
EIGSI, La Rochelle (B-Tech Internship) Development of a numerical regulation system |
| Conferences and Workshops | |
| September 2021 |
Basel, BC2 MaBoSS: SBML-qual compatibility and a web interface for performing simulations (Talk). |
| March 2021 |
EuroHPC Summit Week 2021 / PRACEdays21 HPC enabled multiscale simulations to uncover mechanistic insights in the COVID19 infection (Poster). |
| November 2020 |
Disease Map Community Meeting 2020 PhysiBoSS-COVID: the Boolean modelling of COVID-19 signalling pathways in a multicellular simulation framework allows for the uncovering of mechanistic insights (Poster) |
| September 2020 |
CMSB 2020 Synthesis and Simulation of Ensembles of Boolean Networks for Cell Fate Decision (Talk, with Stéphanie Chevalier) |
| September 2020 |
ECCB 2020 Stochastic quantification of reachability with MaBoSS (Talk) |
| October 2019 |
Blacksburg, International Conference for Systems Biology (ICSB) Ensemble Boolean modeling: example of a model of tumor invasion (Poster). |
| September 2019 |
Basel, BC2 MaBoSS Ecosystem (Talk, with Gautier Stoll) |
| October 2017 |
São Pedro, X-Meeting SigNetSim : A web platform for building and analyzing mathematical models of molecular signaling networks; Dynamical model of the Ras-mediated AP-1 activation in mouse Y1 adrenocortical tumor cells (Posters) |
| August 2017 |
Blacksburg, International Conference for Systems Biology (ICSB) SigNetSim : A web platform for building and analyzing mathematical models of molecular signaling networks (Poster) |
| November 2016 |
Belo Horizonte, X-Meeting SigNetSim : A web-based framework for designing kinetic models of molecular signaling networks, Hierarchical Model of the Ras-MAPK signalling pathway in mouse Y1 adrenocortical tumor cells (Posters) |
| September 2016 |
Newcastle, COMBINE SigNetSim : A web-based framework for designing kinetic models of molecular signaling networks (Talk) |
| September 2016 |
Barcelona, International Conference for Systems Biology SigNetSim : A web-based framework for designing kinetic models of molecular signaling networks (Poster) |
| November 2015 |
São Paulo, X-Meeting SigNetSim: an e-Science framework to design and analyse dynamical models of molecular signaling networks (Poster) |
| August 2015 |
Foz de Iguacu, International Congress of the International Union of Biochemistry and Molecular Biology SigNetSim: Design and analysis of dynamical models of biochemical reaction networks (Poster) |
| April 2015 |
São Paulo, Symmetry and Dynamics in Biology 2015 Design and analysis of dynamical models of biochemical reaction networks (Talk) |
| November 2014 |
Belo Horizone, X-Meeting SigNetSim: an e-Science framework to assist the design of kinetic models of molecular signaling networks (Poster) |
| September 2014 |
Melbourne, International Conference for Systems Biology (ICSB) Mathematical modeling of the crosstalk between Ras/MAPK and PI3K/AKT signaling pathways in the K-Ras-driven mouse Y1 adrenocortical tumor cells provides insights into the mechanisms of FGF2-driven cell cycle arrest (Poster) |
| September 2013 |
Taormina, Workshop Hybrid Systems and Biology 2013 A hybrid mammalian cell cycle model (Talk) |
| July 2012 |
CECAM, Lausanne, Workshop Towards in silico biological cell : Bridging experiments and simulations Piecewise smooth hybrid systems as models for networks in molecular biology (Poster) |
| September 2011 |
Max Planck - Institute für Informatics, Saarbrücken, Workshop on Algorithm in Bioinformatics Piecewise smooth hybrid systems as models for networks in molecular biology (Talk) |
| March 2011 |
Cold Spring Harbour Laboratory, Computational Cell Biology Meeting Piecewise smooth hybrid systems as models for networks in molecular biology (Poster) |
| September 2010 |
Montpellier, Journées ouvertes en Biologie, Informatique et Mathématiques Piecewise smooth hybrid systems as models for biochemical reaction networks (Talk) |
| May 2010 |
Evry, Modélisation des systèmes biologiques complexes dans le contexte de la génomique, Thematic research school Modelling TGFB-dependent NF-kB response in cervical cancer cell lines (Poster) |
| July 2009 |
Max Plank - Institute for Genetics - Berlin, MPI-CNRS Meeting - Robustness by dynamical transitions Modelling TGFB-dependent NF-kB response in cervical cancer cell lines (Talk) |
| Skills | |
| Computer Science |
Programming (C/C++, Java, Python, Assembly, ...) Algorithmic, Data structure, Parallelization, Systems |
| Mathematics |
Mathematical modelling of biological systems Differential and hybrid dynamical systems, Tropical analysis Nonlinear Optimisation Statistics (Classification and Machine learning) Game theory |
| Biology |
Systems Biology (Modelization of signalling pathways and cell cycle) Computational biology (Sequences Algorithmics, Phylogenetics) Cell Biology |
| Vincent Noël |
|